logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002560_29|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002560_03439
Alpha-amylase
CAZyme 11460 12905 + GH13| GH13_5| CBM20
MGYG000002560_03440
hypothetical protein
TC 12963 14039 - 1.A.23.4.1
MGYG000002560_03441
hypothetical protein
null 14177 14692 - No domain
MGYG000002560_03442
hypothetical protein
null 14760 15056 - No domain
MGYG000002560_03443
hypothetical protein
TC 15093 15344 - 1.E.43.1.10
MGYG000002560_03444
hypothetical protein
null 15542 15865 + No domain
MGYG000002560_03445
hypothetical protein
null 15935 16903 + Mn_catalase
MGYG000002560_03446
Pullulanase
CAZyme 16990 18957 - CBM41| CBM20| CBM48| GH13| GH13_14
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is starch

Protein ID eCAMI subfam CAZyme substrate
MGYG000002560_03439 GH13_e8|CBM20_e5|3.2.1.98|3.2.1.41|3.2.1.1|3.2.1.- starch
MGYG000002560_03446 GH13_e38|CBM48_e41|CBM41_e2|CBM20_e23|3.2.1.68|3.2.1.41|3.2.1.1|3.2.1.- starch

Genomic location